Quality thresholds after binning (completeness/contamination, dRep ANI, publication vs refinement gates). Use this skill when: (1) Setting filters for bins before calling them MAGs, (2) Choosing dRep ANI cutoffs, (3) Interpreting CheckM2 reports, (4) Separating refinement entry gates from publication filters, (5) Ranking bin catalogues, (6) Choosing Deepurify vs Anvi'o vs GUNC. For binning, use basalt (recommended), metawrap, or dastool.
